Publications

Journal Articles:

Shantanu Jadhav, Caleb Kemere, P. Walter German, Loren M. Frank, “Causal role of awake hippocampal ripples in learning.” Science, appearing May 2012.
Caleb Kemere, Margaret F. Carr, Mattias P. Karlsson, Feng Zhang, Karl Deisseroth, Loren M. Frank, “Rapid behavioral modulation of hippocampal information processing.” PNAS, in review.
Caleb Kemere, Byron Yu, Gopal Santhanam, Stephen Ryu, Afsheen Afshar, Teresa Meng, and Krishna Shenoy, “Hidden Markov Models for Spatial and Temporal Estimation for Prosthetic Control.” J. Neurophysiology, vol 100, no. 4, Oct. 2008, pp. 2441—2452.
Caleb Kemere, Krishna Shenoy, and Teresa Meng, “Model-Based Neural Decoding of Reaching Movements: A Maximum Likelihood Approach.” IEEE Trans. on Biomedical Engineering, vol. 51, no. 6, pp. 925—932, June 2004.
Byron Yu, Caleb Kemere, Gopal Santhanam, Afsheen Afshar, Stephen Ryu, Teresa Meng, Maneesh Sahani, and Krishna Shenoy, “Mixture of trajectory models for neural decoding of goal-directed movements.” J. Neurophysiology, vol. 97, no. 5, pp. 3763—3780, May 2007.
Zachary Zumsteg, Caleb Kemere, Stephen O’Driscoll, Gopal Santhanam, Rizwan Ahmed, Krishna Shenoy, and Teresa Meng, “Power Feasibility of Implantable Digital Spike Sorting Circuits for Neural Prosthetic Systems.” IEEE Trans. on Neural Systems and Rehabilitation Engineering, vol. 13, no. 3, pp. 272—279, September 2005.

Reviews and Conference Proceedings:

Shantanu Jadhav, Caleb Kemere, Walter German, and Loren Frank, “Selective disruption of awake sharp-wave ripples impairs learning in a spatial working memory task.” Society for Neuroscience Abstracts, Program #731.22, November 2011.
Caleb Kemere, Margaret Carr, Mattias Karlsson, Feng Zhang, Karl Deisseroth, and Loren Frank, “Encoding to consolidation: An optogenetic probe reveals continuous modulation of hippocampal information processing by behavioral state.” Society for Neuroscience Abstracts, Program #100.8, November 2010.
Margaret Carr, Caleb Kemere, Mattias Karlsson, Feng Zhang, Karl Deisseroth, and Loren Frank, “Encoding to consolidation: Behavior and novelty regulate information flow through the hippocampal circuit.” Society for Neuroscience Abstracts, Program #100.7, November 2010.
Caleb Kemere, Feng Zhang, Karl Deisseroth, and Loren Frank, “Behavioral state continuously modulates hippocampal information processing.” Computational and Systems Neuroscience (COSYNE), Program #2-36, February 2010.
Caleb Kemere, Feng Zhang, Karl Deisseroth, and Loren Frank, “Optogenetic control of hippocampal neurons in behaving rats using ChR2.” Society for Neuroscience Abstracts, Program #690.6, November 2008.
Krishna Shenoy et al., “Increasing the performance of cortically-controlled prostheses.” Proc. of the 28th Annual Conference of the IEEE EMBS (EMBS’08), pp. 6652–6655, August 2008.
Michael Linderman et al., “Signal processing challenges for neural prostheses.” IEEE Signal Processing Magazine, vol. 25, no. 1, pp. 18–28, January 2008.
Caleb Kemere, Byron Yu, Gopal Santhanam, Stephen Ryu, Afsheen Afshar, Teresa Meng, and Krishna Shenoy, “Hidden Markov models for spatial and temporal estimation for prosthetic control.” Society for Neuroscience Abstracts, Program #256.17, October 2006.
Stephen O’Driscoll, Teresa Meng, Krishna Shenoy, and Caleb Kemere, “Neurons to Silicon: Implantable Prosthesis Processor.” Proc. of the International Solid State Circuits Conference (ISSCC’06), session 30 (program number 30.1): 552-553 & 672, February 2006.
Byron Yu, Caleb Kemere, Gopal Santhanam, Afsheen Afshar, Stephen Ryu, Teresa Meng, Maneesh Sahani, and Krishna Shenoy,  “Mixture of trajectory models for neural decoding of goal-directed movements. ” Society for Neuroscience Abstracts, Program #520.18, November 2005.
Caleb Kemere and Teresa Meng, “Optimal estimation of feedforward-controlled linear systems.” Proc. IEEE Intl. Conf. on Acoustics, Speech, and Signal Processing (ICASSP’05), vol. 5, pp. 353–356, March 2005.
Caleb Kemere, Gopal Santhanam, Stephen Ryu, Byron Yu, Teresa Meng, and Krishna Shenoy, “Reconstruction of arm trajectories from plan and peri-movement motor cortical activity.” Annual Neural Prosthesis Program Meeting, National Institutes of Health, November 2004.
Caleb Kemere, Gopal Santhanam, Stephen Ryu, Byron Yu, Teresa Meng, and Krishna Shenoy, “Reconstruction of arm trajectories from plan and peri-movement motor cortical activity.” Society for Neuroscience Abstracts, Program #884.12, October 2004.
Caleb Kemere, Gopal Santhanam, Byron Yu, Stephen Ryu, Teresa Meng, and Krishna Shenoy, “Model-based decoding of reaching movements for prosthetic systems.” Proc. of the 26th Annual Conference of the IEEE EMBS (EMBS’04), pp. 4524–4528, September 2004.
Caleb Kemere, Maneesh Sahani, and Teresa Meng, “Robust neural decoding of reaching movements for prosthetic systems.” Proc. IEEE Engineering in Medicine and Biology Society 25th Annual Conference (EMBS’03), pp. 2079–2082, September 2003.
Caleb Kemere, Gopal Santhanam, Byron Yu, Krishna Shenoy, and Teresa Meng, “Decoding of plan and peri-movement neural signals in prosthetic systems.” Proc. IEEE Workshop on Signal Processing Systems (SIPS’02), pp. 276–283, October 2002.

Patents:

Caleb Kemere, Gopal Santhanam, Byron Yu, Teresa Meng, and Krishna Shenoy. “Decoding of neural signals for movement control.”  U. S. Patent No.7,058,445. June 2006.


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